J. Swaroop Guntupalli
Post-doctoral research fellow
Research focus
My research focuses on understanding 1) how information is represented in
different brain regions, 2) how it gets transformed along various processing
pathways, and 3) how these representational spaces are shared across brains.
I use multivariate approaches to model between-subject similarity of representations,
developing methods for aligning neural representational spaces across subjects in different brain regions, and
building common model spaces that capture the essence of information represented in a
brain region.
We developed a functional alignment method called hyperalignment that aligns
the representational spaces across subjects and showed its general validity
across experiments in the ventral temporal cortex (VT). I have since extended our method to
other cortical systems across the whole brain, and developed a general framework to derive
common models of representational spaces across various cognitive domains, and using connectivity profiles.
Here is a simple example showing hyperalignment in action & how to use it in PyMVPA:
Hyperalignment example
Publications
Articles
[NCO+17] | Nastase, S. A. , et al. (2017). Attention selectively reshapes the
geometry of distributed semantic representation. Cerebral Cortex,
27, 4277-4291. [URL] |
[GHH+16] | Guntupalli, J. S. , Hanke, M. , Halchenko, Y. O. , Connolly, A. C. ,
Ramadge, P. J. and Haxby, J. V. (2016). A Model of Representational
Spaces in Human Cortex. Cerebral Cortex, 2919-2934. DOI: 10.1093/cercor/bhw068, cited by: 70 |
[SKG+SD16] | Sengupta, A., Kaule, F. R., Guntupalli, J. S. , Hoffmann, M. B. and H,
(2016). A studyforrest extension, retinotopic mapping and
localization of higher visual areas. Scientific Data, 3, 160093. cited by: 16 |
[SHA+15] | Sha, L., Haxby, J. V. , Abdi, H., Guntupalli, J. S. , Oosterhof, N. N. ,
Halchenko, Y. O. and Connolly, A. C. (2015). The animacy continuum in
the human ventral vision pathway. Journal of Cognitive
Neuroscience, 27:4, 665-678. [PDF] DOI: 10.1162/jocn_a_00733, cited by: 58 |
[CSG+13] | Conroy, B. R., Singer, B. D., Guntupalli, J. S. , Ramadge, P. J. and
Haxby, J. V. (2013). Inter-subject alignment of human cortical
anatomy using functional connectivity. NeuroImage, 81, 400-411. [PDF] [URL] DOI: 10.1016/j.neuroimage.2013.05.009, cited by: 70 |
[GGH+13b] | Gobbini, M. I. , Gors, J. D. , Halchenko, Y. O. , Rogers, C. ,
Guntupalli, J. S. , Hughes, H. and Cipolli, C. (2013). Prioritized
Detection of Personally Familiar Faces. PLoS ONE, 8. DOI: 10.1371/journal.pone.0066620, cited by: 53 |
[CGG+12] | Connolly, A. C. , Guntupalli, J. S. , Gors, J. , Hanke, M. , Halchenko,
Y. O., Wu, Y. , Abdi, H. and Haxby, J. V. (2012). Representation of
biological classes in the human brain. Journal of Neuroscience, 32,
2608-2618. [PDF] DOI: 10.1523/JNEUROSCI.5547-11.2012, cited by: 234 |
[HGC+11] | Haxby, J. V. , Guntupalli, J. S. , Connolly, A. C. , Halchenko, Y. O. ,
Conroy, B. R., Gobbini, M. I. , Hanke, M. and Ramadge, P. J. (2011). A
Common, High-Dimensional Model of the Representational Space in Human
Ventral Temporal Cortex. Neuron, 72, 404-416. [PDF] [PDF:Supp] DOI: 10.1016/j.neuron.2011.08.026, cited by: 289 |
Conference Proceedings
[chen2014joint] | Chen, P., Guntupalli, J. S. , Haxby, J. V. and Ramadge, P. J. (2014).
Joint SVD-Hyperalignment for multi-subject FMRI data alignment. In
(Eds.) Machine Learning for Signal Processing (MLSP), 2014 IEEE
International Workshop on. cited by: 6 |
[lorbert2013collaborative] | Lorbert, A., Guntupalli, J. S. , Eis, D. J., Haxby, J. V. and Ramadge,
P. J. (2013). Collaborative denoising of multi-subject fMRI data. In
(Eds.) Acoustics, Speech and Signal Processing (ICASSP), 2013 IEEE
International Conference on. |
[xu2012regularized] | Xu, H., Lorbert, A., Ramadge, P. J., Guntupalli, J. S. and Haxby, J.
V. (2012). Regularized hyperalignment of multi-set fMRI data. In
(Eds.) Statistical Signal Processing Workshop (SSP), 2012 IEEE. cited by: 25 |
Miscellaneous
Posters
[GH_SFN15] | Guntupalli, J. S. and Tsao, D. Y. (2015). Functional connectivity of
categoryselective patches in macaque IT cortex.. Annual meeting of
the Society for Neuroscience, Chicago, USA. |
[GH_OHBM13] | Guntupalli, J. S. and Haxby, J. V. (2013). Facilitating functional
brain atlases using searchlight-based inter-subject hyperalignment..
Organization of Human Brain Mapping Annual Meeting, Seattle, USA. [PDF] |
[GHRH_SFN12] | Guntupalli, J. S. , Hanke, M. , Ramadge, P. and Haxby, J. V. (2012).
Inter-subject functional connectivity hyperalignment of neural
representational spaces.. Annual meeting of the Society for
Neuroscience, New Orleans, USA. [URL] |
[CGH+11] | Connolly, A. C. , Guntupalli, J. S. , Hanke, M. , Gobbini, M. I. and
Haxby, J. V. (2011). More or less human: The animate-inanimate
distinction in visual cortex may be more continuum than distinction.
Cognitive Neuroscience Society 2011 Annual Meeting, San Francisco,
CA. Poster. [PNG] |
[CWH+11] | Connolly, A. C. , Wu, Y. , Halchenko, Y. O. , Guntupalli, J. S. and
Haxby, J. V. (2011). Scanning parameters for optimal decoding using a
32-channel head coil for fMRI. Vision Sciences Society Annual
Meeting, Naples, FL. Poster. [PNG] |
[GCH10b] | Guntupalli, J. S. , Connolly, A. C. and Haxby, J. V. (2010).
Inter-subject hyperalignment of neural representational spaces to
derive common categorical patterns. Organization of Human Brain
Mapping Annual Meeting, Barcelona, Spain. Poster. [PDF] |
[GCH10c] | Guntupalli, J. S. , Connolly, A. C. and Haxby, J. V. (2010). In search
of functional brain atlases: Deriving common categorical
representational patterns across individuals in ventral visual
pathway. Vision Sciences Society Annual Meeting, Naples, FL.
Poster. [PDF] |
[GH_CNS10] | Guntupalli, J. S. and Haxby, J. V. (2010). In search of a common
representational space for decoding: comparing anatomical alignment,
functional voxel matching, and hyperalignment.. Cognitive
Neuroscience Society 2010 Annual Meeting, Montreal Candada. [PDF] |
[GH_SFN09] | Guntupalli, J. S. and Haxby, J. V. (2009). Inter-subject
hyperalignment of neurl representational space.. Annual meeting of
the Society for Neuroscience, Chicago, USA. [PDF] |
Talks
[Gun13] | Guntupalli, J. S. , Connolly, A. C. and Haxby, J. V. (2013). Exploring
the scale of common dimensions of information decoding in human
ventral temporal cortex. Talk at the Symposium for Decoding and the
spatial scale of cortical organization at the Annual meeting of the
Vision Sciences Society, Naples, USA. [PDF] |
[Gun12] | Guntupalli, J. S. (2012). Hyperalignment: Building common models of
neural representational spaces. Invited talk for the NeuroImaging
Colloquium at Univeristy of Magdeburg, Magdeburg, Germany. [PDF] |
[Gun11] | Guntupalli, J. S. and Haxby, J. (2011). Inter-subject hyperalignment
of neural representational spaces in the auditory cortex. Talk at
the Organization of Human Brain Mapping Annual Meeting, Quebec City,
Canada. [PNG] |
[Gun10a] | Guntupalli, J. S. , Connolly, A. C. and Haxby, J. (2010).
Inter-subject hyperalignment of neural representational spaces to
derive common categorical patterns. Talk at the Organization of
Human Brain Mapping Annual Meeting, Barcelona, Spain. [PDF] |
[Gun10b] | Guntupalli, J. S. and Haxby, J. (2010). Deriving universal neural
representational spaces for decoding brain states. Talk at the
symposium on Decoding Cognitive States from Neuroimaging Data at the
7th International Conference on Cognitive Science, Beijing, China. [PDF] |